Table 4.

Pairwise estimates of F_st between human populations using individual SNP (1, 3, and 5 — above first three diagonals and 2, 4 — below first two diagonals), 5 SNPs (1–5 haplotype — below third diagonal), PSMA6 (1–2 haplotype — above forth diagonal) and PSMC6 (3–4 haplotype — below forth diagonal) SNPs frequencies.

	SNP	LV	LT	TW	CEU	HCB	JPT
LV	1	–	0.00228	0.04483***	0.03655*	0.06299*	0.06299*
LT	2	0.01623**	–	0.07169***	0.06317**	0.09030**	0.09030**
TW		0.15592***	0.07675***	–	− 0.00592	0.00684	0.00684
CEU		− 0.00291	− 0.00097	0.11528***	–	0.0000	0.0000
HCB		0.21074***	0.12179***	0.00162	0.16684***	–	0.0000
JPT		0.23151***	0.14021***	0.00794	0.18688***	− 0.01141	–
LV	3	–	0.01482*	0.00958*	0.00504	0.01850*	0.01822*
LT	4	0.01482*	–	− 0.00107	0.04788*	− 0.00713	− 0.00682
TW		0.00664*	0.00004	–	0.03787*	− 0.00317	− 0.00299
CEU		0.00504	0.04788*	0.03220*	–	0.05595*	0.05534*
HCB		0.01850*	− 0.0071	− 0.00117	0.05595*	–	− 0.01221
JPT		0.01822*	− 0.00682	− 0.00106	0.05534*	− 0.01221	–
LV	5	–	− 0.00122	0.22986***	− 0.00658	0.26355***	0.24855***
LT	1–5	0.00838*	–	0.26109***	− 0.00607	0.29571***	0.28040***
TW		0.13338***	0.11657***	–	0.23385***	− 0.00385	− 0.00509
CEU		0.00107	0.02075**	0.14034***	–	0.26784***	0.25274***
HCB		0.16164***	0.13569***	− 0.00145	0.17120***	–	− 0.011181
JPT		0.16205***	0.13476***	0.00023	0.17074***	− 0.01184	–
D
LV	1–2	–	0.01058*	0.13730***	0.00843	0.19030***	0.20896***
LT	3–4	0.01482*	–	0.07570***	0.01847*	0.11609***	0.13140***
TW		0.00813*	− 0.00052	–	0.10967***	0.00170	0.0792
CEU		0.00504	0.04788*	0.03508	–	0.16266***	0.18235***
HCB		0.01850*	− 0.00713	− 0.00218	0.05595*	–	− 0.01141
JPT		0.01822*	− 0.00682	− 0.00204	0.05534*	− 0.01221	–

* indicates F_st values significantly different from zero: * P < 0.05; ** P < 0.01; *** P < 0.001.