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. 2015 Jan 8;4:188. doi: 10.3389/fcimb.2014.00188

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Copyright © 2015 Gan, Gan, Ahmad, Aziz, Hudson and Savka.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Alignment of plant associated bacteria solos. LuxR solos and selected sphingomonad LuxR homologs. Number above the alignment corresponds to the residue number of the TraR protein. Regions highlighted in yellow indicate the invariant sites of canonical LuxR homologs (Fuqua and Greenberg, 2002) while variation from the conserved site was highlighted in green. The conserved sites corresponding to autoinducer binding and DNA binding were indicated by blue and purple triangles, respectively.