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. 2015 Jan 8;4:188. doi: 10.3389/fcimb.2014.00188

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Copyright © 2015 Gan, Gan, Ahmad, Aziz, Hudson and Savka.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Genomic and genetic evidence for the presence of luxI solos in sphingomonads. (A) Gene neighborhood showing non-LuxR genes located in the vicinity of the putative LuxI genes (arrow with blue diamond). Analysis of the translated protein sequence for the gene upstream and convergently oriented to the putative luxI gene in Sphingobium chinhatense IP26 and Sphingobium sp. KK2 indicates that it may be an N-terminal truncated LuxR protein (arrow with black star). (B) A representative Interproscan analysis domain analysis of the N-terminal truncated LuxR protein noted in Figure 7A. (C) Protein alignment of the putative LuxI solos. Number above the alignment corresponds to the amino acid residue of TraI. Amino acid residues are conserved in all LuxI-type proteins (Fuqua and Greenberg, 2002) are highlighted in yellow.