Table 2.
Clinical Avatars data mapped to the UMLS via MU ontologies.
| Clinical Avatars | MU source mapping (direct) |
UMLS mapping (automatic) |
Term label | ||
| Gender | None |
|
|
||
|
|
F |
|
C0015780 | Female | |
|
|
M |
|
C0024554 | Male gender | |
| Race | OMB standard |
|
|
||
|
|
African American |
|
C0085756 | African American |
|
|
|
Native American |
|
C1515945 | American Indian or Alaska Native | |
|
|
Asian |
|
C0078988 | Asians | |
|
|
White |
|
C0043157 | Caucasians | |
|
|
(no data) |
|
C0086409 | Hispanic or Latino | |
|
|
Pacific Islander |
|
C1513907 | Native Hawaiian or other Pacific Islander | |
|
|
Other/unknown |
|
C1532697 | Unknown racial group | |
| Height | LOINC:3137-7 | C0365282 | Body height measured | ||
| Weight | LOINC:3141-9 | C0365286 | Body weight measured | ||
| BSAa | LOINC:3139-3 | C0365285 | Body surface area measured | ||
| INRb | LOINC:34714-6 | C1369580 | INR in blood by coagulation assay value | ||
| Smoker |
|
|
|
||
|
|
Y | SNOMED CT:77176002 | C0337664 | Smoker | |
|
|
N | SNOMED CT:8392000 | C0337672 | Nonsmoker | |
| DVT c |
|
|
|
||
|
|
Y | SNOMED CT:128053003 | C0149871 | Deep venous thrombosis | |
|
|
N | SNOMED CT:413076004 | C1446197 | No past history of venous thrombosis | |
| AMI d |
|
|
|
||
|
|
Y | SNOMED CT:57054005 | C0155626 | Acute myocardial infarction | |
|
|
N | SNOMED CT:301121007 | C0577811 | Myocardial perfusion normal | |
| CYP2C9 | LNC:46724-1 | C1830800 | cyp2c9 gene mutations found [identifier] in blood or tissue by molecular genetics method nominal | ||
| CYP2C92 | LNC:56164-7 | C2734139 | cyp2c9 gene allele 2 [identifier] in blood by molecular genetics method nominal | ||
| CYP2C93 | LNC:56165-4 | C2734141 | cyp2c9 gene allele 3 [identifier] in blood by molecular genetics method nominal | ||
| VKORC1 | LNC:50722-8 | C1978717 | vkorc1 gene mutations found [identifier] in blood or tissue by molecular genetics method nominal | ||
| VKORC1A | LNC:50722-8 | C1978717 | vkorc1 gene mutations found [identifier] in blood or tissue by molecular genetics method nominal | ||
| VKORC1G | LNC:50722-8 | C1978717 | vkorc1 gene mutations found [identifier] in blood or tissue by molecular genetics method nominal | ||
| Warfarin | RxNorm:11289 | C0043031 | Warfarin | ||
aBSA=body surface area
bINR=international normalized ratio
cDVT=deep vein thrombosis
dAMI=acute myocardial infarction