Table 2. Overview of the fitted model parameters and comparison to values reported in the literature.
| Process | Activation | Deactivation | Reversion | Initiation | Elongation | Splicing | Maturation | Degradation |
|---|---|---|---|---|---|---|---|---|
| Value of fitted rate constant, min−1 | 0.106 | 1.3 | 1.145 | 3.436 | 2.272 0.45 kb/minb | 0.512 | 0.161 | 0.025 |
| Dependent confidence interval | 0.0022 | 0.0256 | 0.2840 | 0.0627 | 0.4780 | 0.0158 | 0.0337 | 0.0008 |
| Independent confidence interval | 0.0499 | 6.8337 | 4.9264 | 18.9385 | 0.7861 | 0.0817 | 0.0940 | 0.0047 |
| Characteristic time, mina | 47.1 | 3.8 | 4 | 0.27 | 2.2 | 9.8 | 31.1 | 202.4 |
| Reported range for characteristic time | 10–150 min (38) | 1–15 min (38) | N/A | 0.8 min (41) | 0.38 -3 kb/min (40,41) | 5–10 min (40) | – | 30–900 min (∼300c min) (25,46) |
aThe characteristic times are defined as n/k, with n as the number of elementary steps in the processes (always n = 5 except for initiation where n = 1).
bThe elongation rate in kb/min as calculated from the fitted characteristic time (2.2 min) and the length of the amplified fragment (1178 nt).
cDegradation rate found specifically for ADRP mRNA.