Skip to main content
. 2015 Jan 7;5:7657. doi: 10.1038/srep07657

Table 3. MM-PBSA values (binding free energies) of RsLA-protein complexes. Each value represents the average value calculated for the last 10 ns of each trajectory with 10 snapshots. SASA, solvent accessible surface area; SAV, solvent accessible volume; WCA, Weeks-Chandler-Andersen.

  Energies (kJ/mol) Human Murine Horse Hamster
Polar Energies Electrostatic −3798.51 +/− 244.91 1360.2 +/− 129.72 282.43 +/− 48.08 245.63 +/− 32.63
  Polar Solvation 647.50 +/− 89.15 332.89 +/− 19.71 272.13 +/− 28.87 350.46 +/− 14.38
Non-Polar energies Van der Waal −873.54 +/− 21.90 −970.53 +/− 30.82 −1069.11 +/− 29.5 −1012.96 +/− 32.0
  SASA −108.36 +/− 2.25 −115.83 +/− 2.55 −121.33 +/− 2.62 −117.65 +/− 2.51
  SAV −1188.88 +/− 36.96 −1206.60 +/− 42.9 −1289.9 +/− 48.78 −1254.09 +/− 23.0
  WCA 357.31 +/− 113.07 573.02 +/− 6.83 600.97 +/− 3.99 570.31 +/− 11.94
  Binding Energy −4964.5 +/− 235.53 −26.85 +/− 146.03 −1324.80 +/− 74.5 −1218.31 +/− 43.1