Table 3. Comparison of assignment completeness using different software.
| Protein | COMPASS | AutoAssign | EZ-ASSIGN | PINE Server | SAGA | |||||
| Peaks (%)1 | NH (%)2 | Peaks (%) | NH (%) | Peaks (%) | NH (%) | Peaks (%) | NH (%) | Peaks (%) | NH (%) | |
| SAP97 PDZ-2 | 100 | 82.6 | 83.3 | 75.6 | 91.2 | 77.4 | 69.0 | 74.8 | 88.8 | 74.8 |
| TPMT*1 | 80.2 | 62.9 | 18.0 | 12.9 | 44.7 | 33.2 | 64.4 | 49.6 | 25.6 | 19.8 |
| EphB2 JMS-KD | 94.6 | 79.0 | 17.5 | 24.7 | 67.6 | 57.3 | 84.6 | 74.9 | 37.8 | 31.5 |
1
Percentage of peaks in all peak lists that were assigned.
2
Percentage of backbone amide groups that were assigned.