Table 2.
Total number of reads mapped to the w Di genome per D . immitis life cycle stage
| Sample | w Di Mapped reads (50 bp) | w Di Mapped bases | 50th Percentile (FPKM) | 75th Percentile (FPKM) | 95th Percentile (FPKM) | Average coverage (FPKM)/Transcript | wDi transcripts detected (%)* |
|---|---|---|---|---|---|---|---|
| AM | 115,048 | 5,752,400 | 91.0 | 215.4 | 1604.7 | 442.4 | 63 |
| AF | 340,598 | 17,029,900 | 171.4 | 375.4 | 2194.9 | 463.5 | 93 |
| mf | 110,894 | 5,544,700 | 1506.6 | 4047.7 | 22,418.4 | 5141.4 | 96 |
| L3 | 26,673 | 1,333,650 | 0 | 106.6 | 769.1 | 287.3 | 48 |
| L4 | 17,619 | 880,950 | 199.0 | 887.2 | 6480.2 | 1849.6 | 57 |
*Based on number of transcripts expressed (FPKM > 0) per life cycle stage.