Table 5.
d N /d S analysis of pairwise comparisons of the RXLR alleles
| Gene ID | Pairwise comparisons | Full sequences | N-terminus b | C-terminus b | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. 1 | Seq. 2 | d N | d S | d N /d S a | P value | d N | d S | d N /d S a | P value | d N | d S | d N /d S a | P value | |
| PcRXLR6 | 10300 | PH-1-8-03 | 0.0091 | 0.0045 | 2.0222 | 4.5e-01 | 0 | 0 | – | 7.3e-01 | 0.0122 | 0.0064 | 1.9063 | 5.8e-01 |
| 10300 | PH-1-14-04 | 0.0036 | 0.0089 | 0.4045 | 4.4e-01 | 0 | 0 | – | 5.9e-01 | 0.0049 | 0.0128 | 0.3828 | 5.4e-01 | |
| PH-1-8-03 | PH-1-14-04 | 0.0054 | 0.0045 | 1.2000 | 8.7e-01 | 0 | 0 | – | 9.2e-01 | 0.0073 | 0.0064 | 1.1406 | 8.7e-01 | |
| PcRXLR7 | PC7 | 10300 | 0.0019 | 0 | ∞ | 3.2e-01 | 0.0042 | 0 | ∞ | 3.2e-01 | 0 | 0 | – | 6.0e-01 |
aThe ‘∞’ in column dN/dS refers to pairwise comparisons in which dN >0 and dS =0, and ‘–’ refers to pairwise comparisons in which dN =0 and dS = 0.
bThe N-terminus refers to the sequence from the 1st to the end of dEER, and the C-terminus refers to the sequence from the immediate residue after dEER to the end, except the stop codon.