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. 2015 Jan 8;96(1):21–36. doi: 10.1016/j.ajhg.2014.11.011

Table 3.

The Top Genetic Variants Identified by SHet and SHom in the COGENT BP Consortium by First Performing Meta-analysis and then SHet and SHom

Chr SNP POS Genes Effect Allele Freq Meta-analysis HTN
Meta-analysis SBP
Meta-analysis DBP
SHom
SHet
beta SE p beta SE p beta SE p p p
Loci Reaching Genome-wide Significance

4 rs11725861 54497062 CHIC2 A 0.84 0.04 0.03 2.16 × 10−1 0.79 0.22 2.89 × 10−4 −0.18 0.13 1.63 × 10−1 2.56 × 10−1 8.45 × 10−9
7 rs11564022 27303571 HOXA-EVX1 T 0.23 −0.12 0.02 2.16 × 10−6 −0.89 0.19 1.83 × 10−6 −0.60 0.11 7.66 × 10−8 2.35 × 10−9 1.34 × 10−8
7 rs11977526 45974635 IGFBP1, IGFBP3 A 0.32 −0.01 0.02 5.30 × 10−1 −0.37 0.18 3.73 × 10−2 0.30 0.11 4.62 × 10−3 8.21 × 10−1 1.87 × 10−8
8 rs2446849 95172673 CDH17 T 0.80 −0.06 0.03 3.00 × 10−2 −0.63 0.20 2.00 × 10−3 0.22 0.12 6.75 × 10−2 2.11 × 10−1 7.01 × 10−9

Loci Reaching Suggestive Significance

3 rs10049492 53571572 CACNA1D A 0.74 0.12 0.03 1.42 × 10−5 0.85 0.19 1.74 × 10−5 0.57 0.12 1.77 × 10−6 7.11 × 10−8 4.60 × 10−7
5 rs6886515 30702383 none A 0.61 0.11 0.02 4.61 × 10−7 0.71 0.17 2.46 × 10−5 0.40 0.10 6.02 × 10−5 7.15 × 10−8 4.63 × 10−7
6 rs9401512 122707473 HSF2/PKIB T 0.30 0.00 0.02 9.17 × 10−1 0.44 0.17 1.04 × 10−2 −0.23 0.10 2.75 × 10−2 9.43 × 10−1 5.75 × 10−8
11 rs11041530 7658079 CYB5R2 C 0.12 −0.09 0.03 9.83 × 10−3 −1.35 0.25 4.04 × 10−8 −0.54 0.15 2.65 × 10−4 9.08 × 10−6 2.55 × 10−7
12 rs11837544 93192534 PLXNC1 A 0.20 −0.01 0.03 5.89 × 10−1 −0.50 0.20 1.36 × 10−2 0.27 0.12 2.28 × 10−2 9.37 × 10−1 6.89 × 10−8
17 rs430685 42214309 GOSR2/WNT3 T 0.02 −0.42 0.14 2.65 × 10−3 1.26 0.84 1.33 × 10−1 1.51 0.50 2.64 × 10−3 8.07 × 10−1 5.77 × 10−8