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. 2014 Dec 8;15(Suppl 9):S10. doi: 10.1186/1471-2164-15-S9-S10

Table 5.

Quality results of all assemblies against the five fungal pathogens at the contigs level.

Dataset ABySS IDBA-UD Minia SOAP SPAdes Sparse Velvet df_1
BcDw1 1.97 1.92 4.42 3.99 1.87 3.91 2.64 2.18

UCRNP2 2.39 1.61 4.69 3.73 2.44 3.81 2.52 1.89

UCRPA7 1.95 1.75 5.24 3.88 1.48 4.58 3.16 2.17

UCREL1 2.21 1.84 5.11 5.01 1.85 4.87 3.14 2.75

PST21 3.27 1.76 4.64 5.58 ------ 4.28 3.08 1.38