Table 3.
Location of putative coding regions on plasmid pSFA231 and the closest relatives of the deduced proteins.
| Gene | Positions | Function | Proteins with highest amino acid identity (%) | Accession no. |
|---|---|---|---|---|
| repA | C 1–1497 | Replication | RepA from pMOL98 (99%) | ACT97177.1 |
| orf2 | C 1472–1732 | Unknown | MOL98_2 from pMOL98 (100%) | ACT97178.1 |
| orf3 | C 1768–2748 | Unknown | MOL98_3 from pMOL98 (100%) | ACT97179.1 |
| yacA | C 2723–3076 | Partitioning | YacA from pTer331 (100%) | YP_001672069.1 |
| parA | D 3250–3957 | Partitioning | ParA from pTer331 (98%) | YP_001672068.1 |
| orf6 | C 4034–4273 | Unknown | MOL98_18 from pMOL98 (99%) | ACT97193.1 |
| orf7 | C 4299–4676 | Unknown | hypothetical protein from Pseudomonas sp. HPB0071 (60%) | WP_010799325.1 |
| orf8 | C 4687–4911 | Unknown | hypothetical 8 kDa protein from uncultured bacterium (100%) | NP_663744.1 |
| orf9 | C 4930–5193 | Unknown | ORF41 from pTer331 (100%) | YP_001672067.1 |
| orf10 | C 5202–5468 | Unknown | ORF40 from pTer331 (100%) | YP_001672066.1 |
| orf11 | C 5541–5810 | Unknown | hypothetical 8.5 kDa protein from uncultured bacterium (99%) | NP_663739.1 |
| orf12 | C 5834–5974 | Unknown | ORF27 from pMOL98 (100%) | ACT97201.1 |
| orf13 | C 6062–6328 | Unknown | ORF28 from pMOL98 (100%) | ACT97202.1 |
| orf14 | C 6537–6985 | Unknown | ORF29 from pMOL98 (99%) | ACT97203.1 |
| orf15 | D 8465–8797 | Unknown | ORF31 from pMOL98 (99%) | ACT97205.1 |
| virB1 | D 8912–9616 | Transfer | VirB1 from pTer331 (98%) | YP_001672057.1 |
| traB | D 9626–11941 | Transfer | TraB from pMOL98 (99%) | ACT97207.1 |
| traC | D 12,106–12,414 | Transfer | TraC from pMOL98 (100%) | ACT97208.1 |
| virB3 | D 12,436–12,747 | Transfer | VirB3 from pTer331 (100%) | YP_001672054.1 |
| traE | D 12,754–15,234 | Transfer | TraE from pMOL98 (100%) | ACT97210.1 |
| traF | D 15,239–15,961 | Transfer | TraF from pMOL98 (98%) | ACT97211.1 |
| traG | D 16,065–16,361 | Transfer | TraG from pMOL98 (98%) | ACT97212.1 |
| traH | D 16,373–17,455 | Transfer | TraH from pMOL98 (100%) | ACT97214.1 |
| traI | D 17,592–17,756 | Transfer | TraI from pMOL98 (100%) | ACT97215.1 |
| traJ | D 17,762–18,472 | Transfer | TraJ from pMOL98 (100%) | ACT97216.1 |
| traK | D 18,469–19,341 | Transfer | TraK from pMOL98 (100%) | ACT97217.1 |
| traL | D 19,341–20,501 | Transfer | TraL from pMOL98 (100%) | ACT97218.1 |
| traM | D 20,485–21,552 | Transfer | TraM from pMOL98 (99%) | ACT97219.1 |
| traN | D 22,100–24,604 | Transfer | TraN from pMOL98 (99%) | ACT97221.1 |
| orf30 | D 24,706–25,401 | Unknown | ORF48 from pMOL98 (99%) | ACT97241.1 |
| traO | D 25,413–27,605 | Transfer | TraO from pMOL98 (99%) | ACT97222.1 |
| traP | D 27,602–28,012 | Transfer | TraP from pMOL98 (99%) | ACT97224.1 |
| orf33 | C 28,048–28,185 | Unknown | – | – |
| traQ | D 28,404–28,964 | Transfer | TraQ from pMOL98 (98%) | ACT97225.1 |
| traR | D 28,978–29,556 | Transfer | TraR from pMOL98 (100%) | ACT97226.1 |
| orf36 | D 29,645–30,124 | Unknown | ORF55 from pMOL98 (99%) | ACT97228.1 |
| traS | C 30,179–31,273 | Transfer | TraS from pMOL98 (100%) | ACT97229.1 |
| orf38 | C 31,270–31,812 | Unknown | ORF57 from pMOL98 (100%) | ACT97230.1 |
| orf39 | C 32,079–32,555 | Unknown | ORF11 from pTer331 (99%) | YP_001672037.1 |
| korB | C 32,552–33,697 | Partioning | KorB from pTer331 (99%) | YP_001672036.1 |
| incC | C 33,698–34,489 | Partioning | IncC from pMOL98 (100%) | ACT97233.1 |
| korA | C 34,486–34,863 | Partioning | KorA from pMOL98 (100%) | ACT97234.1 |
| ssb | C 34,888–35,247 | Partioning | Ssb from pMOL98 (100%) | ACT97235.1 |
| orf44 | C 35,954–36,082 | Unknown | – | – |
| kfrA | C 36,812–37,846 | Partioning | KfrA from pMOL98 (99%) | ACT97236.1 |
| orf46 | C 37,949–38,239 | Unknown | ORF64 from pMOL98 (100%) | ACT97237.1 |
| orf47 | C 38,267–38,659 | Unknown | ORF65 from pMOL98 (100%) | ACT97238.1 |
| orf48 | C 38,663–38,845 | Unknown | ORF4 from pTer331 (100%) | YP_001672030.1 |
| ardC | C 38,927–40,387 | Partioning | ArdC from pMOL98 (99%) | ACT97239.1 |
| parB | C 41,055–41,518.1 | Partioning | ParB from pMOL98 (98%) | ACT97240.1 |