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. 2014 Dec 8;15(Suppl 16):S15. doi: 10.1186/1471-2105-15-S16-S15

Table 1.

Results of MT applied to three short-read alignment programs (BWA, Bowtie and Bowtie2) ran on the paired-end sequencing simulated reads of varying number.

MRs 103 104 105 106 107
BWA

MR1 F F F F F
MR2 F F F F F
MR3 F F F F F
MR4 F F F F
MR5 F F F F F
MR6
MR7 F F
MR8
MR9

Bowtie

MR1
MR2 F F F F F
MR3
MR4
MR5 F F F F F
MR6
MR7
MR8 F F F F F
MR9

Bowtie2

MR1
MR2 F F F F F
MR3
MR4
MR5 F F F F F
MR6
MR7
MR8 F F F F F
MR9

F (Failure).