TABLE 1.
Reference virus species used in microarray validation
| Family | Genus | Species | Straina | No. of positive probes/totalb |
|---|---|---|---|---|
| Astroviridae | Mammastrovirus | Human astrovirus | Yuc8 | 4/4 |
| Adenoviridae | Mastadenovirus | Human adenovirus C | Adv5 | 10/13 |
| Caliciviridae | Vesivirus | Feline calicivirus | F9 | 14/22 |
| Norovirus | Norwalk virusc | 8/12 | ||
| Sapovirus | Sapporo virusc | 5/14 | ||
| Flaviviridae | Pestivirus | Bovine viral diarrhea virus 1 | NADL | 6/6 |
| Flavivirus | Dengue virus 4 | 9/9 | ||
| Paramyxoviridae | Respirovirus | Bovine parainfluenza virus 3 | SF-4 | 9/9 |
| Reoviridae | Rotavirus | Rotavirus A | RRV | 22/42 |
| TFR-41 | 14/42 | |||
| UK | 19/42 | |||
| Wa | 21/42 | |||
| Orthoreovirus | Mammalian orthoreovirus | T1L | 11/25 | |
| T3D | 19/25 |
a
Reference strains were provided by Ramon Gonzalez, FC-UAEM (human adenovirus C), Lorena Gutierrez, CINVESTAV-IPN (feline calicivirus, Norwalk virus, and Sapporo virus), Rosa E. Sarmiento, FMVZ-UNAM (bovine viral diarrhea virus 1 and bovine parainfluenza virus 3), Rosa María Del Angel, CINVESTAV-IPN (dengue virus 4), and Terrence S. Dermody, Vanderbilt University School of Medicine (mammalian orthoreovirus).
b
Number of oligonucleotide probes which recognized virus/total number of oligonucleotide probes designed to bind viral species.
c
Clinical reference samples.