TABLE 1.
Number of single nucleotide polymorphisms in the core genome within and between the major phylogenomic clades of N. gonorrhoeae strains
| Clade | No. of isolates | Avg no. of SNPs within clade | Maximum no. of SNPs within clade | Avg no. of SNPs from previous cladea | Minimum no. of SNPs from previous cladea | Maximum no. of SNPs from previous cladea |
|---|---|---|---|---|---|---|
| A | 64 | 48.3 | 214 | |||
| B | 3 | 3.0 | 3 | 181.7 | 154 | 281 |
| C | 3 | 34.0 | 51 | 206.0 | 181 | 219 |
| D | 4 | 9.0 | 16 | 114.3 | 85 | 128 |
| E | 9 | 158.4 | 463 | 530.0 | 467 | 545 |
| F | 5 | 50.0 | 91 | 535.0 | 451 | 575 |
| G | 6 | 1.6 | 3 | 510.1 | 483 | 531 |
| H | 16 | 45.2 | 159 | 695.3 | 667 | 741 |
| I | 15 | 155.4 | 816 | 852.7 | 819 | 949 |
| J | 8 | 245.3 | 865 | 889.7 | 845 | 927 |
| K | 7 | 50.2 | 63 | 862.6 | 819 | 893 |
| L | 4 | 5.2 | 9 | 878.8 | 868 | 887 |
a
Number of single nucleotide polymorphisms (SNPs) compared to the previous closest common ancestal clade.