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. 2014 Dec 18;53(1):35–42. doi: 10.1128/JCM.02395-14

TABLE 1.

The 73 housekeeping genes selected for investigation for use in the genus MLST scheme

Syntenic block Relative location on each syntenic block in relation to the Y. enterocolitica 8081 reference genome:
Size (bp) Housekeeping gene(s) in each block
Beginning End
1 0 107030 107,030 asnA, dfp, tpiA, glnA
2 108300 191330 83,030 sthA
3 191500 202555 11,055 rhlB, rho
4 282830 313630 30,800 udp, aarF, hemB
5 879520 980830 101,310 pcm, recA
6 1039400 1251800 212,400 gloB, nadB, guaA, nrdF, nrdE
7 1802900 1991400 188,500 purB, ptsG, phoQ, phoP, purT, pip, tmk, icdA
8 2027865 2087750 59,885 kduD1
9 2108500 2142600 34,100 NDa
10 2154500 2325300 170,800 tyrR
11 2447240 2499700 52,460 topB, ansA, dadA, nhaB, fadR, xthA
12 2554700 2591553 36,853 minD, zwf, aspS, znuC, znuA, znuB, minC, rnd, msbB
13 2602500 2630230 27,730 kdsA, prfA, hemA
14 2640950 2668185 27,235 chaA
15 2668285 2709585 41,300 ND
16 2709700 2800900 91,200 ND
17 2854263 3294700 440,437 folE, nadA, udk, sfcA, glnS
18 3313400 3544778 231,378 proB, rosA, hemH, adk
19 3610900 3712864 101,964 thyA, tas, lgt, galR, lysS, prfB
20 3726200 3761260 35,060 tktA, speA, gshB, endA
21 3960000 4238800 278,800 rfaE, pyrB, parC, gcp, uxaC
22 4245400 4464400 219,000 ND
23 4504400 4561500 57,100 fdoI, fdhE, glnQ
Total size of syntenic blocks 2,639,427
Total size of Y. enterocolitica 8081 genome 4,615,899
a

ND, no housekeeping genes present in the syntenic block.