TABLE 1.
Syntenic block | Relative location on each syntenic block in relation to the Y. enterocolitica 8081 reference genome: |
Size (bp) | Housekeeping gene(s) in each block | |
---|---|---|---|---|
Beginning | End | |||
1 | 0 | 107030 | 107,030 | asnA, dfp, tpiA, glnA |
2 | 108300 | 191330 | 83,030 | sthA |
3 | 191500 | 202555 | 11,055 | rhlB, rho |
4 | 282830 | 313630 | 30,800 | udp, aarF, hemB |
5 | 879520 | 980830 | 101,310 | pcm, recA |
6 | 1039400 | 1251800 | 212,400 | gloB, nadB, guaA, nrdF, nrdE |
7 | 1802900 | 1991400 | 188,500 | purB, ptsG, phoQ, phoP, purT, pip, tmk, icdA |
8 | 2027865 | 2087750 | 59,885 | kduD1 |
9 | 2108500 | 2142600 | 34,100 | NDa |
10 | 2154500 | 2325300 | 170,800 | tyrR |
11 | 2447240 | 2499700 | 52,460 | topB, ansA, dadA, nhaB, fadR, xthA |
12 | 2554700 | 2591553 | 36,853 | minD, zwf, aspS, znuC, znuA, znuB, minC, rnd, msbB |
13 | 2602500 | 2630230 | 27,730 | kdsA, prfA, hemA |
14 | 2640950 | 2668185 | 27,235 | chaA |
15 | 2668285 | 2709585 | 41,300 | ND |
16 | 2709700 | 2800900 | 91,200 | ND |
17 | 2854263 | 3294700 | 440,437 | folE, nadA, udk, sfcA, glnS |
18 | 3313400 | 3544778 | 231,378 | proB, rosA, hemH, adk |
19 | 3610900 | 3712864 | 101,964 | thyA, tas, lgt, galR, lysS, prfB |
20 | 3726200 | 3761260 | 35,060 | tktA, speA, gshB, endA |
21 | 3960000 | 4238800 | 278,800 | rfaE, pyrB, parC, gcp, uxaC |
22 | 4245400 | 4464400 | 219,000 | ND |
23 | 4504400 | 4561500 | 57,100 | fdoI, fdhE, glnQ |
Total size of syntenic blocks | 2,639,427 | |||
Total size of Y. enterocolitica 8081 genome | 4,615,899 |
ND, no housekeeping genes present in the syntenic block.