Table 2.
Gene Name |
MW. | ID. Count | Avg. Seq. Coverage |
Avg. Unique Peptides |
Norm. Spectral Intensity |
||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Rank | Accession | Protein name | (kDa) | N | I | IIb | N | I | IIb | N | I | IIb | I/N | IIb/I | |
82 | IPI00363534 | LAMA1 | Laminin alpha-1 | 338 | 3 | 4 | 4 | 3% | 8% | 6% | 3 | 30 | 25 | 90.06 ** | 0.73 |
49 | IPI00361301 | LAMA2 | Laminin alpha-2 | 344 | 4 | 4 | 4 | 8% | 9% | 7% | 30 | 35 | 29 | 1.69 * | 0.69 |
720 | IPI00768265 | LAMA3 | Laminin alpha-3 | 346 | 1 | 2 | 2 | 1% | 1% | 1% | 2 | 2 | 2 | 2.78 | 0.45 |
70 | IPI00361106 | LAMA4 | Laminin alpha-4 | 176 | 4 | 4 | 4 | 8% | 6% | 5% | 17 | 10 | 9 | 0.31 * | 0.92 |
59 | IPI00190577 | LAMA5 | Laminin alpha-5 | 404 | 4 | 4 | 4 | 4% | 8% | 7% | 12 | 26 | 23 | 9.61 *** | 0.76 |
35 | IPI00365542 | LAMB1 | Laminin beta-1 | 203 | 4 | 4 | 4 | 12% | 17% | 14% | 19 | 27 | 26 | 2.19 ** | 0.83 |
30 | IPI00212868 | LAMB2 | Laminin beta-2 | 196 | 4 | 4 | 4 | 18% | 13% | 12% | 31 | 23 | 20 | 0.34 *** | 0.76 |
508 | IPI00363443 | LAMB3 | Laminin beta-3 | 129 | 1 | 4 | 4 | 3% | 3% | 4% | 1 | 3 | 4 | 2.05 * | 3.76 |
28 | IPI00363849 | LAMC1 | Laminin gamma-1 | 177 | 4 | 4 | 4 | 20% | 20% | 19% | 27 | 28 | 28 | 1.22 | 0.74 ** |
() P < 0.05
() P < 0.01
() P < 0.001
ID Count = number of runs, out of the four experiments, in which a protein was identified. Norm. Spectral Intensity=summed intensity of MS/MS product ions for all spectra mapped to a given protein normalized by molecular weight.