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Observed and expected number of SNPs with p-values <0.05 and <0.01
| Category | Tumor | Number of SNPs tested* | Number of SNPs with p-value<0.01 (expected) | Number of SNPs with p-value<0.05 (expected) |
|---|---|---|---|---|
| BRCA1 | BrCa | 3232 | 25 (32) | 202 (162) |
| BRCA1 | OvCa | 3160 | 13 (32) | 146 (158) |
| BRCA2 | BrCa | 3230 | 5 (32) | 96 (161) |
| BRCA2 | OvCa | 3157 | 6 (32) | 131 (159) |
Not all the 3,248 SNPs were tested in each category/tumor group
