Table 5.
Percentage of simple repeats identified in the analyzed sequences
| Type | Percentage | Type | Percentage |
|---|---|---|---|
| Mononucleotide | 94.93 a | Tetranucleotide | 0.13 |
| A/T | 91.44b | AATG | 29.63 |
| C/G | 8.56 | AAAG | 16.67 |
| Dinucleotide | 2.45 | ATAC | 14.81 |
| AT | 49.55 | AACT | 14.81 |
| AG | 30.60 | AATA | 12.96 |
| AC | 19.85 | AATT | 11.11 |
| Trinucleotide | 2.38 | Other | 19.40 |
| AAT | 55.96 | Pentanucleotide | 0.01 |
| AGG | 12.04 | Hexanucleotide | 0.10 |
| AAC | 11.92 | AGGATG | 50.58 |
| AAG | 11.88 | AGGAAG | 30.65 |
| ATG | 6.28 | Other | 12.67 |
| Other | 1.92 |
Bold font indicates percent frequencies of main groups of repeats
aPercent frequency of SSR type
bPercent frequency of SSR subgroup within the particular SSR type