TABLE 1.
ChIP-qPCR primers
IDa | Primer | Chr | Directionb | Position |
Sequence | |
---|---|---|---|---|---|---|
Start | End | |||||
0 | Neg | 3R | F | 12526683 | 12526702 | CCTAAATGGCAGAGGATTGG |
R | 12526792 | 12526773 | AAATTCAGGATGCAGGATGC | |||
1 | R1 | 3R | F | 12528866 | 12528885 | ATCAGCAGCCGTTGAGTAGG |
R | 12528971 | 12528952 | ATTCCTCAGCGACAAAGAGC | |||
2 | R2 | 3R | F | 12529660 | 12529679 | GAGTTGCCATAAAGCACTCG |
R | 12529764 | 12529745 | TTCTCTTCGCAGCCTATTCC | |||
3 | R3 | 3R | F | 12529861 | 12529880 | TTACAGCCGACACCTCATCA |
R | 12529987 | 12529968 | CTGGCTTGACACTGGGCTAC | |||
4 | R4 | 3R | F | 12530745 | 12530769 | CTCGCTGGTTCCTAATATGATATAC |
R | 12530863 | 12530846 | GTGCCTTTCGGTGACTTC | |||
5 | R5 | 3R | F | 12531112 | 12531129 | GCACAGATTCCGTTGAGC |
R | 12531253 | 12531234 | CCTTCTATGCTCTGCTCTCG | |||
+ve | BXC-49 | 3R | F | 12760726 | 12760707 | ATCGATAAAAAGCGCCAACA |
R | 12760565 | 12760584 | GCTCTTACTGCCCGATTCTG | |||
−ve | SuVar 3-9 | 3R | F | 11087377 | 11087396 | AGCCGCTACTATTGCTTGGA |
R | 11087573 | 11087554 | GCAGCGACAGCAGTATGAAA | |||
Ubx-P | F-675 | 3R | F | 12559800 | 12559819 | AATACTTGGATTGCGCTTGC |
R | 12560001 | 12559982 | TTTCCACTAGATTGGCGTCC |