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. 2014 Dec 9;35(1):318–330. doi: 10.1128/MCB.01061-14

TABLE 1.

ChIP-qPCR primers

IDa Primer Chr Directionb Position
Sequence
Start End
0 Neg 3R F 12526683 12526702 CCTAAATGGCAGAGGATTGG
R 12526792 12526773 AAATTCAGGATGCAGGATGC
1 R1 3R F 12528866 12528885 ATCAGCAGCCGTTGAGTAGG
R 12528971 12528952 ATTCCTCAGCGACAAAGAGC
2 R2 3R F 12529660 12529679 GAGTTGCCATAAAGCACTCG
R 12529764 12529745 TTCTCTTCGCAGCCTATTCC
3 R3 3R F 12529861 12529880 TTACAGCCGACACCTCATCA
R 12529987 12529968 CTGGCTTGACACTGGGCTAC
4 R4 3R F 12530745 12530769 CTCGCTGGTTCCTAATATGATATAC
R 12530863 12530846 GTGCCTTTCGGTGACTTC
5 R5 3R F 12531112 12531129 GCACAGATTCCGTTGAGC
R 12531253 12531234 CCTTCTATGCTCTGCTCTCG
+ve BXC-49 3R F 12760726 12760707 ATCGATAAAAAGCGCCAACA
R 12760565 12760584 GCTCTTACTGCCCGATTCTG
−ve SuVar 3-9 3R F 11087377 11087396 AGCCGCTACTATTGCTTGGA
R 11087573 11087554 GCAGCGACAGCAGTATGAAA
Ubx-P F-675 3R F 12559800 12559819 AATACTTGGATTGCGCTTGC
R 12560001 12559982 TTTCCACTAGATTGGCGTCC
a

ID, identifiers used in Fig. 1, 2, and 6.

b

F, forward; R, reverse.