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. 2014 Dec 9;35(1):52–62. doi: 10.1128/MCB.00525-14

TABLE 1.

Functional clusters associated with the highest-score networks identified by Ingenuity pathway analysis and their scores for gene categories in FHL2-KO versus WT SMCsa

Network Top diseases and functions Scoreb
1 Cell cycle, connective tissue disorders, developmental disorder 40
2 Hereditary disorder, neurological disease, lipid metabolism 36
3 Drug metabolism, molecular transport, nucleic acid metabolism 35
4 RNA posttranscriptional modification, protein synthesis, connective tissue disorders 33
5 Cellular response to therapeutics, cancer, developmental disorder 31
6 Cell cycle, cellular assembly and organization, amino acid metabolism 31
7 Cellular development, cardiovascular system development and function, hematological system development and function 31
8 Posttranslational modification, embryonic development, organ development 31
9 Skeletal and muscular system development and function, tissue development, cellular movement 30
10 Cellular movement, cellular growth and proliferation, embryonic development 30
11 Developmental disorder, hereditary disorder, neurological disease 29
12 Cellular assembly and organization, DNA replication, recombination, and repair, cell cycle 29
13 Cancer, developmental disorder, hereditary disorder 29
14 Cancer, cardiovascular disease, cellular assembly and organization 29
15 Lipid metabolism, small molecule biochemistry, vitamin and mineral metabolism 28
16 Amino acid metabolism, posttranslational modification, small molecule biochemistry 28
17 Cellular development, cellular growth and proliferation, hematological system development and function 27
18 Cell-to-cell signaling and interaction, nervous system development and function, cellular assembly and organization 26
19 Cell-to-cell signaling and interaction, cellular assembly and organization, cellular function and maintenance 26
20 Cellular function and maintenance, small molecule biochemistry, molecular transport 26
21 Embryonic development, organismal development, organ development 26
22 Cellular assembly and organization, cellular compromise, cell-to-cell signaling and interaction 26
23 Skeletal and muscular system development and function, behavior, cellular movement 26
24 Lipid metabolism, molecular transport, small molecule biochemistry 25
25 Protein synthesis, lipid metabolism, small molecule biochemistry 25
a

Pathways involving cell cycle regulation are underlined, and pathways involving lipid and cholesterol metabolism are in bold.

b

−Log10(P value).