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. 2014 Dec 28;2014:295421. doi: 10.1155/2014/295421

Table 4.

Amplification specificity of TMPCR and 16S rDNA-specific PCR.

Organism Strains tested
  (n = 100)
Specificity (%)
TMPCRa 16S rDNA PCRb
V. cholerae O1 21 100 100
V. cholerae O139 16 100 100
V. cholerae NAG Ic 16 100 100
V. cholerae NAG IId 16 100 100
Other vibrios 8 0 100
Gram-negative bacteria 16 0 100
Gram-positive bacteria 7 0 100

aThe specificity (%) = strains showing a positive amplification of expected amplicon sizes by TMPCR as having no cross-hybridization with negative controls/a total of strains tested, multiplied by 100.

bAs for 16S rDNA-specific PCR, no cross-hybridization occurred in reactions containing nuclease-free water or no DNA.

cNAG I non-O1/non-O139 growing in semisolid agar in the presence of sucrose and mannose but not arabinose.

dNAG II non-O1/non-O139 growing in semisolid agar only supplemented with sucrose.