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. 2015 Jan 15;10(1):e0113170. doi: 10.1371/journal.pone.0113170

Table 1. Summary of RNA-Seq data.

Tissue/Cells Mouse mRNA-Seq Total number of
strain genotype Gender Sequenced reads Mapped reads [%]
Sorted ORNs C57BL6 transgene OMP-GFP homozygous mixed Illumina/Genome Analyser II, 72 bp reads, single-end 13,574,176 8,857,058 65.25
Sorted ORNs C57BL6 transgene OMP-GFP heterozygous mixed Illumina/HiSeq2000, 101 bp reads, paired end 58,234,129 34,519,988 59.28
OE1 CD1 WT male RNA-Seq (DNS-Normalization) Illumina/Genome Analyser II, 36 bp reads, single-end 37,284,951 28,881,184 77.46
OE2 CD1 WT male Illumina/Genome Analyser II, 101 bp reads, paired-end 40,053,764 28,363,505 70.81
OE3 CD1 WT male Illumina/Genome Analyser II, 101 bp reads, paired-end 36,141,244 26,397,003 73.04
OE4 CD1 WT male Illumina/Genome Analyser II, 101 bp reads, paired-end 11,394,752 8,384,689 73.58
OE1 CD1 WT female RNA-Seq (DNS-Normalization)Illumina/Genome Analyser II, 36 bp reads, single-end 52,716,231 38,700,603 73.41
OE2 CD1 WT female Illumina/HiSeq 2000, 101 bp reads, paired-end 54,589,506 36,103,429 66.14
OE3 CD1 WT female Illumina/HiSeq 2000, 101 bp reads, paired-end 57,808,346 39,268,107 67.93
OE4 CD1 WT female Illumina/HiSeq 2000, 101 bp reads, paired-end 33,354,414 24,884,683 74.61
OE5 CD1 WT female Illumina/HiSeq 2000, 101 bp reads, paired-end 19,807,752 14,513,434 73.27
OE1 C57BL6 WT female Illumina/HiSeq 2000, 101 bp reads, paired-end 86,404,176 63,862,406 73.91
OE2 C57BL6 WT female Illumina/HiSeq 2000, 101 bp reads, paired-end 30,763,538 22,694,013 73.77
OE3 C57BL6 WT female Illumina/HiSeq 2000, 101 bp reads, paired-end 25,520,854 17,789,702 69,7
OE4 C57BL6 WT female Illumina/HiSeq 2000, 101 bp reads, paired-end 25,520,328 18,831,564 73.79