Table V.
H/HS hexasaccharide sequences that satisfied the CVLS strategy for thrombin
| No. | Hexasaccharide sequencea | GoldScoreb | No. of H-bondsc |
|---|---|---|---|
| 1XMN | |||
| 1 | ua2A-Yb26A-uc2A-Yb2A-uaA-Yb236A | 121.48 | 14 |
| 1TB6 | |||
| 1 | ua2A-Yb23A-uc2A-YbC6A-ua2A-Yb26A | 136.13 | 13 |
| 2 | ua2A-Yb26A-ucA-Yb23A-ua2A-Yb26A | 130.38 | 13 |
| 3 | ua2A-YbC6A-uc2A-YbC6A-ua2A-YbH36A | 129.36 | 12 |
| 4 | ua2A-YbCA-uc2A-Yb26A-ua2A-YbH36A | 128.91 | 14 |
aSee definitions of residue labels and substitution in Table I.
bRefers to modified GoldScore, as defined in Methods.
cNumber of hydrogen bonds calculated using LIGPLOT.