Table S1.
TaqMan gene expression assays employed to monitor aquaporin expression
Gene product | Substrate | ABI assay IDa | Interrogated sequence RefSeq | Translated protein RefSeq | NCBI location chromosome | Exon boundary |
---|---|---|---|---|---|---|
AQP1 | H2O | Hs00166067_m1b | NM_198098.1 | NP_932766.1 | Chr. 7 – 30951415–30965131 | 1–2, assay loc: 492 |
AQP3 | H2O Glycerol H2O2 NH4+ Urea |
Hs00185020_m1 | NM_004925.3 | NP_004916.1 | Chr. 9 – 33441158–33447590 | 2–3 assay loc: 297 |
AQP4 | H2O | Hs00242342_m1 | NM_001650.4 | NP_001641.1 | Chr. 18 – 24432007–24445716 | 2–3 assay loc: 508 |
AQP5 | H2O | Hs00387048_m1 | NM_001651.2 | NP_001642.1 | Chr. 12 – 50355279–50359461 | 1–2 assay loc: 888 |
AQP7 | H2O Glycerol Urea |
Hs00357359_m1 | NM_001170.1 | NP_001161.1 | Chr. 9 – 33384948–33402517 | 2–3 assay loc: 199 |
AQP8 | H2O H2O2 NH4+ |
Hs00154124_m1 | NM_001169.2 | NP_001160.2 | Chr. 16 – 25228285–25240253 | 2–3 assay loc: 339 |
AQP9 | H2O Glycerol Urea |
Hs00175573_m1 | NM_020980.3 | NP_066190.2 | Chr. 15 – 58430408–58478110 | 1–2 assay loc: 467 |
TNF-α | Hs99999043_m1 | NM_000594.2 | NP_000585.2 | Chr. 6 – 31543350–31546112 | 1–2 assay loc: 360 | |
IL-23A | Hs00372324_m1 | NM_016584.2 | NP_057668.1 | Chr. 12 – 56732663–56734194 | 1–2 assay loc: 323 | |
COX-2/PTGS2 | Hs00153133_m1 | NM_000963.2 | NP_000954.1 | Chr. 1 – 186640944–186649559 | 5–6 assay loc: 777 |
Notes:
All assays used dye label FAM;
An assay whose probe spans an exon junction and does not detect genomic DNA.
Abbreviations: HS, Homo sapiens; AQP, aquaporin; IL, interleukin; loc, location; COX-2, cyclooxygenase 2; TNF-α, tumor necrosis factor-α.