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. Author manuscript; available in PMC: 2016 Feb 25.
Published in final edited form as: Vet Microbiol. 2014 Dec 2;175(0):294–303. doi: 10.1016/j.vetmic.2014.11.019

Fig. 1. Neighbor-joining tree for phyla Firmicutes, Actinobacteria and Fusobacteria.

Fig. 1

The evolutionary history was inferred using the Neighbor-Joining method (Saitou and Nei, 1987). The percentage of replicate trees in which the associated taxa clustered together in the bootstrap test (500 replicates) are shown next to the branches (Felsenstein, 1985). The evolutionary distances were computed using the Jukes-Cantor method (Jukes and Cantor, 1969). The scale equals 0.05 substitutions per site. Evolutionary analyses were conducted in MEGA6 (Tamura et al., 2013). The branch position of clades representing the three phyla are marked with ‘●’.