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. 2014 Nov 17;32(2):495–509. doi: 10.1093/molbev/msu320

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© The Author 2014. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Fig. 5. — Overview of all 17 haplotype-blocks in the base population. Each horizontal line represents one of the 29 sequenced haplotypes in the base population (b1–b29). Each panel represents an autosomal chromosome arm (no haplotype-block was detected on the X-chromosome). The haplotype-blocks are numbered from 1 to 17 and their position is indicated by a bold line. A visual explanation of how haplotype-blocks were identified is given in figure 4 and supplementary figure S11, Supplementary Material online. Solid rectangles highlight haplotype-blocks that overlap the same genomic region (i.e., 1 & 2 and 15 & 16). The dashed lines indicate chromosomal positions of the cosmopolitan D. melanogaster inversions In(2L)t, In(2R)Ns, In(3L)P, In(3R)Payne, In(3R)C, In(3R)Mo (Ashburner and Lemeunier 1976; Corbett-Detig and Hartl 2012).