Table 1.

Inversions in the Sequenced Haplotype Data.

	29 Base Haplotypes (F0)			29 Evolved Haplotypes (F67)
	Inversion Carriers	# Inversion Carriers	Inversion Frequency	Inversion Carriers	# Inversion Carriers	Inversion Frequency	Change in Frequency
In(2L)t	1, 6, 7, 10, 12, 13, 19, 22, 28, 29	10	0.34	2, 5, 7, 14, 15, 17, 22, 24, 25	9	0.31	−0.03
In(2R)Ns	6	1	0.03	0	0	0.00	−0.03
In(3L)P	2, 7, 22, 23, 28	5	0.17	2	1	0.03	−0.14
In(3R)K	None	0	0.00	None	0	0.00	0.00
In(3R)C	19, 20, 22, 23, 26, 28	6	0.21	2, 14, 25, 27, 28	5	0.17	−0.03
In(3R)Mo	1	1	0.03	15	1	0.03	0.00
In(3R)Payne	8, 11, 16, 21, 24, 25	6	0.21	0	0	0.00	−0.21