Table 4.
Previously cloned genes identified in 5D survey sequence reads
Gene | No. of matching reads | Total length | Matched length | Coverage (%) | Average depth |
---|---|---|---|---|---|
5DS | |||||
Pina-D1 | 6 | 447 | 447 | 100.00 | 2.48 |
Pinb-D1 | 6 | 828 | 447 | 53.99 | 2.29 |
Nor-D3* | 165 | 887 | 887 | 100.00 | 50.54 |
5S-RNA-D2* | 71 | 486 | 486 | 100.00 | 32.59 |
5DL | |||||
Vrn-D1 | 9 | 980 | 833 | 85.00 | 2.16 |
ADH1D | 3 | 1140 | 235 | 20.61 | 1.60 |
Vrn3 | 1 | 1100 | 135 | 12.27 | 1.00 |
Lr1 | 90 | 4035 | 3958 | 98.09 | 7.00 |
*Repetitive reads were included in searches for these sequences.