Table 3.
Number of confirmed CNVs and confirmation rate for each tested array
| Confirmed CNVs | SNP 6.0 | 2.7 M | Omni1 | CytoSNP | CGX-12 | All arrays |
|---|---|---|---|---|---|---|
| Total number (%a) | 48 (19.2%) | 24 (11.1%) | 57 (30.8%) | 24 (96.0%) | 27 (46.6%) | 180 (72.0%) |
| Gains (%b) | 28 (13.9%) | 13 (7.6%) | 30 (38.5%) | 15 (93.8%) | 14 (51.9%) | 100 (20.2%) |
| Losses (%c) | 20 (40.8%) | 11 (25.0%) | 27 (25.2%) | 9 (100.0%) | 13 (41.9%) | 80 (33.3%) |
| De novo (%d) | 17 (12.2%) | 11 (7.3%) | 12 (34.3%) | 7 (87.5%) | 25e (44.6%) | 72 (51.8%) |
| Inherited (%f) | 31 (27.9%) | 13 (19.7%) | 45 (30.0%) | 17 (100.0%) | 2 (100.0%) | 108 (77.7%) |
aConfirmation rate = number of confirmed CNVs divided by number of detected CNVs by each array, expressed in %.
bConfirmation rate = number of confirmed gains divided by number of detected gains by each array, expressed in %.
cConfirmation rate = number of confirmed losses divided by number of detected losses by each array, expressed in %.
dConfirmation rate = number of confirmed de novo CNVs divided by number of detected de novo CNVs by each array, expressed in %.
eDe novo or inheritance unknown (parents not systematically tested).
fConfirmation rate = number of confirmed inherited CNVs divided by number of detected inherited CNVs by each array, expressed in %.