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. 2014 Dec 29;15:157. doi: 10.1186/s12863-014-0157-9

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© Piccoli et al.; licensee Biomed Central. 2014

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Concordance rate of imputation by MAF classes. a) Average over scenarios of imputation from alternative low density panels (3K, 6K, 8K, 15K and 20K, 50K, 90iK and 90tK) to the 777K SNP panel; b) Average over scenarios of imputation from alternative low density panels (3K, 6K, 8K, 15K, 20K) to the 777K SNP panel in two-step imputation. Within a group of colums, two different letters means a statistical difference (P < 0.05).