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. 2014 Dec 29;15:157. doi: 10.1186/s12863-014-0157-9

Table 1.

Summary statistics of genotyped animals and pedigree structure of the 50K and the 777K SNP panels

Parameter Braford Hereford Nellore
Imputation to the 50K SNP panel
Total of genotyped animals 2,946 664 88
Sires 39 29 6
Dams 76 21 0
Offspring 2,831 614 82
Offspring with sire and/or dam genotyped (%) 22.81 32.68 12.50
Average number of offspring per sire 15.28 ± 17.38 6.76 ± 6.46 1.83 ± 0.90
Smallest and largest number of offspring per sire 1-76 1-26 1-3
Average number of offspring per dam 1.00 ± 0.00 1.00 ± 0.00 1.00 ± 0.00
Offspring with sire and/or dam unknown (%) 69.86 48.04 18.18
Imputation to the 777K SNP panel
Total of genotyped animals 71 59 88
Sires 8 3 5
Dams 0 0 0
Offspring 63 56 83
Offspring with sire and/or dam genotyped (%) 25.35 8.47 10.23
Average number of offspring per sire 2.25 ± 1.09 1.67 ± 0.94 1.80 ± 0.98
Smallest and largest number of offspring per sire 1-4 1-3 1-3
Average number of offspring per dam 0.00 ± 0.00 0.00 ± 0.00 0.00 ± 0.00
Offspring with sire and/or dam unknown (%) 53.52 38.98 18.18