Table 1.
Summary statistics of genotyped animals and pedigree structure of the 50K and the 777K SNP panels
| Parameter | Braford | Hereford | Nellore |
|---|---|---|---|
| Imputation to the 50K SNP panel | |||
| Total of genotyped animals | 2,946 | 664 | 88 |
| Sires | 39 | 29 | 6 |
| Dams | 76 | 21 | 0 |
| Offspring | 2,831 | 614 | 82 |
| Offspring with sire and/or dam genotyped (%) | 22.81 | 32.68 | 12.50 |
| Average number of offspring per sire | 15.28 ± 17.38 | 6.76 ± 6.46 | 1.83 ± 0.90 |
| Smallest and largest number of offspring per sire | 1-76 | 1-26 | 1-3 |
| Average number of offspring per dam | 1.00 ± 0.00 | 1.00 ± 0.00 | 1.00 ± 0.00 |
| Offspring with sire and/or dam unknown (%) | 69.86 | 48.04 | 18.18 |
| Imputation to the 777K SNP panel | |||
| Total of genotyped animals | 71 | 59 | 88 |
| Sires | 8 | 3 | 5 |
| Dams | 0 | 0 | 0 |
| Offspring | 63 | 56 | 83 |
| Offspring with sire and/or dam genotyped (%) | 25.35 | 8.47 | 10.23 |
| Average number of offspring per sire | 2.25 ± 1.09 | 1.67 ± 0.94 | 1.80 ± 0.98 |
| Smallest and largest number of offspring per sire | 1-4 | 1-3 | 1-3 |
| Average number of offspring per dam | 0.00 ± 0.00 | 0.00 ± 0.00 | 0.00 ± 0.00 |
| Offspring with sire and/or dam unknown (%) | 53.52 | 38.98 | 18.18 |