Table 2.
Distribution of Cas-proteins in L. crispatus
| OrthoMCL-family | Cas-model | 125-2-CHN | 214-1 | CTV-05 | FB049-03 | FB077-07 | JV-V01 | MV-1A-US | MV-3A-US | SJ-3C-US | ST1 | Total | Total with models |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| LACT01579 | Csn2 | 1/1 | 1/1 | 1/1 | 1/1 | 1/1 | 1/1 | 1/1 | 1/1 | 1/1 | 0 | 9 | 9 |
| LACT01697 | Cas2 | 0 | 1/0 | 1/1 | 1/1 | 1/1 | 1/1 | 1/1 | 1/1 | 1/0 | 0 | 8 | 6 |
| LACT01698 | Cas1 | 0 | 1/1 | 1/1 | 1/1 | 1/1 | 1/1 | 1/1 | 1/1 | 1/1 | 0 | 7 | 7 |
| LACT01822 | Csn2 | 0 | 1/1 | 1/1 | 1/1 | 1/1 | 1/1 | 0 | 1/1 | 1/1 | 0 | 7 | 7 |
| LACT01823 | Cas9/Csn1 | 0 | 1/1 | 0 | 1/0 | 1/0 | 1/1 | 1/1 | 1/1 | 1/0 | 0 | 7 | 4 |
| LACT01825 | Cas9/Csn1 | 0 | 0 | 1/0 | 1/1 | 1/1 | 1/0 | 1/0 | 1/0 | 1/1 | 0 | 7 | 3 |
| LACT02396 | Cas9/Csn1 | 0 | 0 | 0 | 1/1 | 1/1 | 0 | 0 | 0 | 1/1 | 0 | 3 | 3 |
| LCRIS_01207 | cas-CT1978 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1/1 | 1 | 1 |
| LCRIS_01209 | casE-Cse3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1/1 | 1 | 1 |
| LCRIS_01210 | casD-Cas5e, CRISPR-cas5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1/1 | 1 | 1 |
| LCRIS_01211 | casC-Cse4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1/1 | 1 | 1 |
| LCRIS_01212 | casB-cse2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1/1 | 1 | 1 |
| LCRIS_01214 | Cas3-core, Cas3-HD | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1/1 | 1 | 1 |
| Total | 1/1 | 5/4 | 5/4 | 7/6 | 7/6 | 6/5 | 5/4 | 6/5 | 7/5 | 6/6 | 54 | 45 |
The first number in the table cells describes the number of CDSs part of the Cas-protein associated ortholog group in a specific strain and the second number indicates the number of group members matching the Cas-model.