Table 2.
Some gene model statistics
| Species | Contig N50 (kbp) | Average gene length | Average exon number | % complete genes | % InterPro coverage |
|---|---|---|---|---|---|
| O. sativa | 3,090 | 2.5 | 77 | 68 | |
| B. distachyon | 3,582 | 5.6 | 99 | 86 | |
| H. vulgare | 0.9/3.2 | 2,812 | 5.4 | 76 | 84 |
| T. urartu | 3.4/5.8 | 3,208 | 4.7 | 78 | 78 |
| Ae. tauschii | 4.5/6.2 | 2,935 | 4.9 | 100 | 77 |
| T. aestivum | 2.4/6.3 | 2,197 | 3.8 | 56 | 84 |
Contig N50 reported twice, once for the complete assembly/and once for just the gene-containing contigs.
Complete genes are defined as those starting with a methionine, ending in a stop codon.
InterPro coverage consists only of structural protein domains and functional motifs, excluding low complexity, coiled-coil, transmembrane and signal motifs.