Table 1.
Genes deregulated in livers of both 3 and 12 months mice exposed to U and D waters
| Transcripts Cluster Id | Gene name | Gene description | Fold change | |||
|---|---|---|---|---|---|---|
| 3 months | 12 months | |||||
| U vs Ctrl | D vs Ctrl | U vs Ctrl | D vs Ctrl | |||
| 10603833 | Usmg5 | Upregulated during skeletal muscle growth 5 | -4.53 | -4.28 | -2.83 | -2.95 |
| 10374476 | Rps17 | Ribosomal protein S17 | -2.96 | -3.19 | -1.85 | -1.89 |
| 10357242 | Dbi | Diazepam binding inhibitor | -2.87 | -2.71 | -1.84 | -2.23 |
| 10387816 | Rnasek | Ribonuclease, RNase K | -2.17 | -2.33 | -1.61 | -1.78 |
| 10344817 | Cspp1 | Centrosome and spindle pole associated protein 1 | -1.75 | -1.62 | -1.80 | -2.38 |
| 10483809 | Nfe2l2 | Nuclear factor, erythroid derived 2, like 2 | -1.66 | -1.78 | -1.71 | -1.81 |
| 10500798 | -1.57 | -1.78 | -2.75 | -2.78 | ||
| 10598089 | mt-Te | tRNA glutamic acid, mitochondrial | 2.12 | 2.47 | 4.20 | 5.01 |
| 10598087 | ND6 | NADH dehydrogenase subunit 6 | 2.82 | 3.37 | 1.86 | 3.73 |
| 10598073 | mt-Tq | tRNA glutamine, mitochondrial | 4.07 | 5.85 | 5.67 | 7.28 |
| 10528191 | Speer4d|Speer4c|Speer4e| | Spermatogenesis associated glutamate (E)-rich protein 4d/4c/4e | 4.13 | 4.67 | 1.65 | 1.80 |
| 10598083 | mt-Ts1 | tRNA serine 1, mitochondrial | 5.32 | 6.71 | 3.00 | 4.83 |
| 10598091 | mt-Tp | tRNA proline, mitochondrial | 5.62 | 7.62 | 3.11 | 3.85 |
| 10598075 | mt-Ta | tRNA alanine, mitochondrial | 5.93 | 7.82 | 16.92 | 26.75 |
| 10598023 | mt-Tv | tRNA valine, mitochondrial | 6.17 | 6.69 | 4.21 | 5.75 |
| 10519811 | Speer8-ps1|Speer7-ps1 | Spermatogenesis associated glutamate (E)-rich protein 7/8, pseudogene 1 | 6.34 | 6.92 | 3.13 | 3.88 |
| 10598057 | mt-Tr | tRNA arginine, mitochondrial | 6.40 | 7.63 | 10.12 | 28.13 |
| 10436773 | Gm7735|Gm9789 | 6.48 | 6.90 | 3.75 | 3.25 | |
| 10412517 | Gm3002|Gm10021|Gm3512 | 7.66 | 10.80 | 3.88 | 4.55 | |
| 10582888 | 7.70 | 9.65 | 2.83 | 5.64 | ||
| 10598081 | mt-Ty | tRNA tyrosine, mitochondrial | 10.46 | 13.91 | 6.51 | 10.49 |
| 10598079 | mt-Tc | tRNA cysteine, mitochondrial | 10.88 | 15.64 | 4.72 | 7.30 |
| 10598018 | mt-Tf | tRNA phenylalanine, mitochondrial | 11.56 | 14.23 | 14.71 | 27.37 |
| 10598062 | mt-Th | tRNA histidine, mitochondrial | 13.20 | 15.78 | 27.68 | 46.30 |
| 10598077 | mt-Tn | tRNA asparagine, mitochondrial | 21.72 | 32.04 | 6.55 | 9.85 |
| 10598041 | mt-Tk | tRNA lysine, mitochondrial | 24.14 | 28.86 | 39.43 | 66.79 |
| 10598071 | mt-Tt | tRNA threonine, mitochondrial | 27.51 | 35.77 | 7.81 | 15.37 |
| 10598064 | mt-Tl2 | tRNA leucine 2, mitochondrial | 58.00 | 70.56 | 44.83 | 70.91 |
| 10353034 | Snord87 | Small nucleolar RNA, C/D box 87 | -3.20 | -3.39 | 2.83 | 2.77 |
| 10398451 | Rps25|Gm4963 | Ribosomal protein S25 | predicted gene 4963 | -1.70 | -1.81 | 1.75 | 1.80 |
| 10465831 | 5730408K05Rik | RIKEN cDNA 5730408 K05 gene | -2.26 | -2.30 | 4.41 | 4.10 |
In bold, genes inversely deregulated in the two data sets. mt- stays for mitochondrial.
The arithmetic fold change is reported.