Table 3.
Previous AAU associations
| Chr | Position* | rsid | Gene | Uncond P value |
B27 Cond P value |
Top two Cond P value | Top Three Cond P value |
Reference |
|---|---|---|---|---|---|---|---|---|
| 1 | 206948639 | rs6703630 | IL10 | 0.0381204 | 14 | |||
| 1 | 206945381 | rs2222202 | IL10 | 0.550083 | 14 | |||
| 1 | 206945311 | rs3024490 | IL10 | 0.12393 | 14 | |||
| 6 | 31542482 | rs1799724 | TNF-857 | 7.04E-40 | 0.178664 | 0.01679 | 0.00718782 | 17,18 |
| 6 | 31543101 | rs361525 | TNF-308 | 2.74E-11 | 0.0680665 | 0.244505 | 0.361933 | 17,18 |
| 6 | 31543031 | rs1800629 | TNF-238 | 7.79E-32 | 0.00296247 | 0.0158237 | 0.0760507 | 17,18 |
| 6 | 31542308 | rs1799964 | TNF-103 | 2.67E-18 | 0.0645271 | 0.337868 | 0.303424 | 17 |
| 6 | 31542476 | rs1800630 | TNF-863 | 3.58E-09 | 0.244742 | 0.580368 | 0.440478 | 17 |
| 6 | 31914935 | rs1048709 | CFB | 4.11E-09 | 0.202212 | 0.749028 | 0.404371 | 16 |
| 12 | 58162739 | rs703842 | CYP27B1 | 0.00279726 | 13 |
*
Human genome build 19, Uncond: Unconditioned result. B27 Cond: Conditioned on HLA-B27 dose as imputed by SNP2HLA. Top two Cond: Result after conditioning on rs116488202 and rs114102658. Top Three Cond: Result after conditioning on rs116488202, rs114102658 and rs149567432