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. 2014 Nov 18;290(4):2042–2052. doi: 10.1074/jbc.M114.608786

TABLE 1.

Sequences of primers, siRNA sequences, and shRNA sequences used in real time PCR experiments

Name Sequence
Primers
    mPGRN Forward 5′-TTC ACA CAC GAT GCG TTT CA-3′
Reverse 5′-AGG GCA CAC AGA AAA AG-3′
    mPIRO Forward 5′-CCT TTT TCA GTT TTC CTC GCC-3′
Reverse 5′-TGC ACA CTG AAG GAC CTG GAA-3′
    mc-Fos Forward 5′-GGT GAA GAC CGT GTC AGG AG-3′
Reverse 5′-TAT TCC GTT CCC TTC GGA TT-3′
    mNFATc1 Forward 5′-GAG TAC ACC TTC CAG CAC CTT-3′
Reverse 5′-TAT GAT GTC GGG GAA AGA GA-3′
    mTRAP Forward 5′-TCA TGG GTG GTG CTG CT-3′
Reverse 5′-GCC CAC AGC CAC AAA TCT-3′
    mOSCAR Forward 5′-GGA ATG GTC CTC ATC TGC TT-3′
Reverse 5′-GGA ATG GTC CTC ATC TGC TT-3′
    mGAPDH Forward 5′-TCA AGA AGG TGG TGA AGC AG-3′
Reverse 5′-AGT GGG AGT TGC TGT TGA AGT-3′
    hPGRN Forward 5′-TCC CCC TAA CCA AAT TCT CC-3′
Reverse 5′-GGG ATG GCA GCT TGT AAT GT-3′
    hPIRO Forward 5′-CCT TTT TCA GTT TTC CTC GCC-3′
Reverse 5′-TGC ACA CTG AAG GAC CTG GAA-3′
    hGAPDH Forward 5′-TCA AGA AGG TGG TGA AGC AG-3′
Reverse 5′-GGT GGA GGA GTG GGT GTC-3′

siRNA sequences (duplex)
    mPIRO-siRNA 1 Sense 5′-CUC CAU AUU CCA GGU CCU U(dTdT)-3′
Antisense 5′-AAG GAC CUG GAA UAU GGA G(dTdT)-3′
    mPIRO-siRNA 2 Sense siRNA 2 5′-CGU CCU AAA GUG UGU AUU U(dTdT)-3′
Antisense siRNA 2 5′-AAA UAC ACA CUU UAG GAC G(dTdT)-3′
    mPIRO-siRNA 3 Sense siRNA 3 5′-CGU CCU AAA GUG UGU AUU U(dTdT)-3′
Antisense siRNA 3 5′-AAA UAC ACA CUU UAG GAC G(dTdT)-3′
    hPIRO-siRNA1 Sense siRNA 3 5′-CAC UUA UGA GUG AGA ACA U(dTdT)-3′
Antisense siRNA 3 5′-AUG UUC UCA CUC AUA AGU G(dTdT)-3′
    hPIRO-siRNA2 Sense siRNA 3 5′-CUC CAU UUU UCA AGU CUC A(dTdT)-3′
Antisense siRNA 3 5′-UGA GAC UUG AAA AAU GAC G(dTdT)-3′
    hPIRO-siRNA3 Sense siRNA 3 5′-CUG UCU UCU UGC CAU AUU U(dTdT)-3′
Antisense siRNA 3 5′-AAA UAU GGC AAG ACA G(dTdT)-3′

shRNA sequences (vector: pMLP-GFP)
    mPGRN-shRNA 1 5′-AAAGGAGGTGAAGTGCGACATATAGTGAAGCCACAGATGTATATGTCGCACTTCACCTCCTTC-3′
    mPGRN-shRNA 2 5′-ATGACCTGATCCAGAGTAAGTATAGTGAAGCCACAGATGTATACTTACTCTGGATCAGGTCAC-3′
    mPGRN-shRNA 3 5′-AGAGAAGGGCATTTCTGCCATATAGTGAAGCCACAGATGTATATGGCAGAAATGCCCTTCTCC-3′
    hPGRN-shRNA 1 5′-ATGCCCTGATGGTTCTACCTGATAGTGAAGCCACAGATGTATCAGGTAGAACCATCAGGGCAC-3′
    hPGRN-shRNA 2 5′-AAAGGACACTTCTGCCATGATATAGTGAAGCCACAGATGTATATCATGGCAGAAGTGTCCTTC-3′
    hPGRN-shRNA 3 5′-ACAACGTGAAGGCTCGATCCTATAGTGAAGCCACAGATGTATAGGATCGAGCCTTCACGTTGC-3′
    hPGRN-shRNA 4 5′-ACCCAGGGCTACACGTGTGTAATAGTGAAGCCACAGATGTATTACACACGTGTAGCCCTGGGG-3′