Skip to main content
. 2014 Dec 3;145(2):187–192. doi: 10.3945/jn.114.202150

TABLE 2.

SNPs in the SCARB1 region associated with serum lycopene in transethnic fixed-effects meta-analysis1

Meta-analysis
African American
Hispanic American
European American
SNP A1/A2 P β P-het I2 P β CAF MAF P β CAF MAF P β CAF MAF
rs1672879* G/T 2.68 × 10−9 −0.14 0.25 28.3 7.85 × 10−5 −0.12 0.59 0.41 6.26 × 10−6 −0.20 0.77 0.23 0.14 −0.09 0.97 0.03
rs701107 A/G 2.43 × 10−8 −0.13 0.30 17.2 2.59 × 10−4 −0.12 0.60 0.40 2.04 × 10−5 −0.19 0.77 0.23 0.15 −0.09 0.97 0.03
rs838861 T/C 2.32 × 10−8 −0.14 0.19 40.4 7.29 × 10−4 −0.11 0.67 0.33 4.65 × 10−6 −0.20 0.78 0.22 0.14 −0.09 0.97 0.03
1

Baseline model was further adjusted for age, BMI, and first 4 principal components of ancestry. *SNP with the most significant association in the meta-analysis with serum lycopene for this region. A1/A2, coded/noncoded allele; CAF, coded allele (A1) frequency; I2, index of the degree of heterogeneity; MAF, minor allele frequency; P-het, P values for heterogeneity, indicating whether effect sizes are homogeneous across ancestry samples; SCARB1, scavenger receptor class B member 1; SNP, single nucleotide polymorphism.