Table 2.
Scales | F | MCC | PPV | NPV |
---|---|---|---|---|
Guy | 0.75 ± 0.12 | 0.71 ± 0.13 | 0.82 ± 0.10 | 0.94 ± 0.03 |
Miyazawa | 0.74 ± 0.11 | 0.70 ± 0.12 | 0.80 ± 0.10 | 0.94 ± 0.03 |
Manavalan | 0.74 ± 0.11 | 0.70 ± 0.12 | 0.80 ± 0.10 | 0.94 ± 0.03 |
Sweet | 0.74 ± 0.08 | 0.71 ± 0.08 | 0.83 ± 0.11 | 0.94 ± 0.03 |
Fauchere | 0.74 ± 0.08 | 0.70 ± 0.09 | 0.83 ± 0.12 | 0.94 ± 0.02 |
Rose | 0.73 ± 0.12 | 0.70 ± 0.13 | 0.82 ± 0.09 | 0.94 ± 0.03 |
Black | 0.71 ± 0.05 | 0.67 ± 0.06 | 0.81 ± 0.12 | 0.93 ± 0.02 |
Woods | 0.68 ± 0.12 | 0.64 ± 0.13 | 0.78 ± 0.12 | 0.93 ± 0.03 |
Breese | 0.68 ± 0.11 | 0.63 ± 0.13 | 0.75 ± 0.15 | 0.93 ± 0.02 |
Leo | 0.68 ± 0.10 | 0.64 ± 0.12 | 0.79 ± 0.15 | 0.93 ± 0.02 |
Kyte-Doolittle | 0.67 ± 0.13 | 0.63 ± 0.14 | 0.78 ± 0.14 | 0.93 ± 0.03 |
Roseman | 0.64 ± 0.15 | 0.59 ± 0.17 | 0.75 ± 0.15 | 0.92 ± 0.03 |
Chothia | 0.63 ± 0.11 | 0.59 ± 0.13 | 0.77 ± 0.15 | 0.92 ± 0.03 |
Argos | 0.63 ± 0.09 | 0.59 ± 0.10 | 0.78 ± 0.13 | 0.92 ± 0.02 |
Janin | 0.59 ± 0.14 | 0.55 ± 0.12 | 0.74 ± 0.11 | 0.91 ± 0.03 |
Tanford | 0.57 ± 0.14 | 0.53 ± 0.14 | 0.72 ± 0.15 | 0.91 ± 0.02 |
Eisenberg | 0.56 ± 0.16 | 0.53 ± 0.18 | 0.74 ± 0.20 | 0.91 ± 0.03 |
Welling | 0.50 ± 0.15 | 0.48 ± 0.13 | 0.78 ± 0.19 | 0.89 ± 0.02 |
Wolfenden | 0.46 ± 0.11 | 0.43 ± 0.13 | 0.69 ± 0.15 | 0.89 ± 0.02 |
For equations and explanations, see the Methods section at the end of this manuscript:
F: the F1 score
MCC: Matthew Correlation Coefficient
PPV: Positive Predictive Values
NPV: Negative Predictive Values