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. 2015 Jan 1;71(Pt 1):34–40. doi: 10.1107/S2053230X1402617X

Table 5. Hydrogen-bonding interactions of GMPPNP in complex with dmRab2Q65L and dmRab3Q80L .

Distances 3.2 are given. Canonical interactions of the - and -phosphates of GMPPNP with the protein backbone of the P-loops are not listed.

GMPPNP dmRab2Q65L Distance () dmRab3Q80L Distance ()
Guanine base O6 Ala150N 2.9 Ala165N 2.9
N1 Asp122OD1 2.8 Asp137OD1 2.8
N2 Asp122OD2 2.8 Asp137OD2 2.9
N7 Asn119ND2 3.1 Asn134ND2 3.2
Ribose O2 Gln32O 2.8 Thr47O 2.9
O2 Pro33O 2.8    
O3 Pro33O 3.2 Ser48O 2.7
-Phosphate O1G Gly64N 2.8 Gly79N 2.8
O2G Thr38N 3.0 Thr53N 2.8
O2G Thr38OG2 2.7 Thr53OG2 2.9
O3G Thr15OG2 2.6 Ser30OG 2.7
O3G His35NE2 2.9 Ser52OG 2.6