Table 1. Transcript characteristics and genomic coordinates for five circular and four corresponding linear RNAs.
circular RNAs | corresponding linear transcripts | ||||||
---|---|---|---|---|---|---|---|
circular RNA | length in nt | exon number | genomic coordinates (HG19) | annotated gene (TaqMan system) | length in nt | exon number | genomic coordinates (HG19) |
circ0817 | 653 | 5 | chr11:107,916,996-107,925,682 | CUL5 (Hs00967474_m1) | 6,408 | 18 | chr11:107,879,408-107,978,488 |
circ3204 | 706 | 6 | chr15:63,824,845-63,855,207 | USP3 (Hs01002673_m1) | 5,759 | 16 | chr15:63,796,710-63,886,839 |
circ6229 | 629 | 2 | chr14:21,971,315-21,972,024 | METTL3 (Hs0196158_m1) | 4,538 | 9 | chr14:21,966,282-21,979,457 |
circ7374 | 288 | 1 | chr17:38,638,380-38,638,668 | TNS4 (Hs00937025_g1) | 4,090 | 13 | chr17:38,632,080-38,657,854 |
circ7780 | 317 | 2 | chr7:153,555,574-153,562,137 | - | - | - | - |