Table 1.

RPCs of HMG Genes

HMG gene	Query mRNA	mRNA length (bp)	CDS (% GC)	Number of exons	Location	Total number of matches	Number of RPCs (% ID)	Number of PS (% ID)
HMGA1	NM_002131.1	1875	60	6	6p21.1b	8	6 (75–95)	2 (74–83)
HMGA2	NM_003483.3	4111	58	?	12q14.1b	0	0
HMGB1	D63874.1	1194	44	5	13q12.3a	59	57 (64–97)	2 (73–88)
HMGB2	X62534.1	1301	47	5	4q34.1b	4	2 (86–90)	2 (80–90)
HMGB3	NM_005342.1	1633	46	5	Xq28d	45	33 (66–95)	12 (72–94)
HMGN1	NM_004965.1	1240	51	6	21q22.3a	66	55 (66–97)	11 (78–93)
HMGN2	NM_005517.1	1198	51	6	1p36.11c	73	65 (82–98)	8 (84–96)
HMGN3	AF274949.1	863	46	6	6q16.1b	1	1 (93)	0
All						256	219	37

Query mRNA sequences were taken from RefSeq whenever possible. (RPCs) Retroposed copies; (PS) hits that did not cross splice junctions, see text; (% ID) identity to the query mRNA.