Table 2.
Differentially expressed genes (fold change (fc) at least 2) within the sample group flight space (FS, front/rear CC) compared to in-flight centrifugation (FC). Samples taken after 5-day cultivation at microgravity and sorted according to the overrepresented biological processes identified by GSEA to be the most prominent.
| Number | ATG number | Gene name/description | log(fc) | Enriched Gene set (biological process) |
|---|---|---|---|---|
| 1 | ATCG00065 | Ribosomal protein S12 | 2.36 | Translation |
| 2 | ATCG00660 | Ribosomal protein L20 | 2.14 | Translation |
| 3 | ATCG00770 | 30S ribosomal protein S8 | 1.96 | Translation |
| 4 | ATCG00160 | Ribosomal protein S2 | 1.84 | Translation |
| 5 | ATCG00790 | Ribosomal protein L16 | 1.8 | Translation |
| 6 | ATCG00780 | Ribosomal protein L14 | 1.63 | Translation |
| 7 | AT1G13950 | Eukaryotic translation initiation factor 5A-1 | 1.14 | Translation |
| 8 | ATCG01120 | Ribosomal protein S15 | 1.11 | Translation |
| 9 | ATCG00750 | Ribosomal protein S11 | 1.05 | Translation |
| 10 | ATCG00800 | Ribosomal protein S3 | 1.04 | Translation |
| 11 | ATMG00650 | NADH dehydrogenase subunit 4L | 2.3 | Mitochondrial electron transport |
| 12 | ATMG00060 | NADH dehydrogenase subunit 5 | 1.84 | Mitochondrial electron transport |
| 13 | AT2G07751 | NADH-ubiquinone/plastochinone oxidoreductase | 1.75 | Mitochondrial electron transport |
| 14 | ATCG01050 | Subunit of NAD(P)H dehydrogenase complex | 1.74 | Mitochondrial electron transport |
| 15 | ATMG00160 | Cytochrome c oxidase subunit 2 | 1.66 | Mitochondrial electron transport |
| 16 | ATMG00070 | NADH dehydrogenase subunit 9 | 1.5 | Mitochondrial electron transport |
| 17 | ATCG00420 | NADH dehydrogenase subunit J | 1.43 | Mitochondrial electron transport |
| 18 | ATCG01250 | NADH dehydrogenase ND2 | 1.25 | Mitochondrial electron transport |
| 19 | ATMG00510 | NADH dehydrogenase subunit 7 | 1.24 | Mitochondrial electron transport |
| 20 | ATMG00270 | NADH dehydrogenase subunit 6 | 1.24 | Mitochondrial electron transport |
| 21 | ATMG00580 | NADH dehydrogenase subunit 4 | 1.19 | Mitochondrial electron transport |
| 22 | ATCG01070 | NADH dehydrogenase ND4L | 1.13 | Mitochondrial electron transport |
| 23 | ATCG00120 | ATPase α-subunit | 2.15 | ATP biosynthesis |
| 24 | ATCG00140 | ATPase III subunit | 1.59 | ATP biosynthesis |
| 25 | ATMG00410 | ATPase subunit 6 | 1.56 | ATP biosynthesis |
| 26 | ATCG00130 | ATPase F subunit | 1.47 | ATP biosynthesis |
| 27 | ATCG00480 | β-Subunit of ATP synthase | 1.33 | ATP biosynthesis |
| 28 | ATCG00150 | Subunit of ATPase complex CF0 | 1.12 | ATP biosynthesis |