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. 2015 Jan 28;9(1):e0003446. doi: 10.1371/journal.pntd.0003446

Table 2. EatA sequence conservation in geographically, temporally, and phylogenically disparate isolates.

strain accession origin isolation reported phenotype identity1 (%) Similarity (%) ref.
H10407
Q84GK0.1
Bangladesh
1973
cholera-like
-
-
[52]
Throop D 2 EMW91712.1 Dallas, TX 1976 cholera-like 98 99 [36]
Envira 10/1 2 EMX71514.1 Amazon, Brazil 1998 cholera-like 97 98 [35]
Juruá 18/11 2 EMX58104.1 Amazon, Brazil 1998 cholera-like 96 98 [35]
2850750 2 EMW01116.1 Bangladesh 2008 cholera-like 96 97 5
2871950 2 EMV49671.1 Bangladesh 2008 cholera-like 96 98 5
P0305293.1 2 EMZ82436.1 Bangladesh 2011 cholera-like 97 98 5
P0304777.1 2 EMX02137.1 Bangladesh 2011 cholera-like 96 97 5
2720900 2 EMX91421.1 Bangladesh 2007 cholera-like 100 100 5
178900 2 ENA71292.1 Bangladesh 2010 cholera-like 98 99 5
180200 2 ENA61350.1 Bangladesh 2010 cholera-like 96 98 5
2722950 2 EMZ73955.1 Bangladesh 2007 mild-self-limited 98 99 5
tw10598 3 AELA00000000.1 Guinea-Bissau 1996 diarrhea4 96 98 [49]
tw10722 3 AELB00000000.1 Guinea-Bissau 1996 diarrhea4 95 98 [49]
tw10828 3 AELC00000000.1 Guinea-Bissau 1996 diarrhea4 95 97 [49]
tw11681 3 AELD00000000.1 Guinea-Bissau 1996 diarrhea4 98 99 [49]
B2C ETS27975.1 Vietnam 1971 diarrhea4 96 98 [62]
E24377A YP_001451588.1 Egypt 1980s diarrhea4 96 97 [63]

1based on BLAST-P searches against 1042 residues of predicted passenger domain of H10407.

3open reading frames corresponding to the eatA gene were first assembled from whole genome shotgun sequence contigs for these draft genomes; BLASTP for these homologues was conducted using CLC Main Workbench v6.9.1 and local database of predicted protein sequences derived from translation of assembled contigs from the respective sequencing projects.

4(severity unknown)

5this study