Skip to main content
. 2014 Oct 9;6(1):804–815. doi: 10.1039/c4sc02130d

Table 2. Structure–activity relationships for carbamide based HDAC inhibitors30 .

Inline graphic
HDAC isoform inhibition IC50 a (μM)
[Brain]/[plasma] and brain free fraction b (%)
Compound R1 group R2 group HDAC1 HDAC2 HDAC3
5 graphic file with name c4sc02130d-u8.jpg graphic file with name c4sc02130d-u9.jpg 0.059 ± 0.015 0.261 ± 0.140 0.949 ± 0.034 nd
6 graphic file with name c4sc02130d-u10.jpg graphic file with name c4sc02130d-u11.jpg 4.24 ± 0.257 3.13 ± 0.492 25.0 ± 1.71 nd
7 graphic file with name c4sc02130d-u12.jpg graphic file with name c4sc02130d-u13.jpg 0.072 ± 0.029 0.086 ± 0.057 0.350 ± 0.018 nd
8 graphic file with name c4sc02130d-u14.jpg graphic file with name c4sc02130d-u15.jpg 0.020 ± 0.003 0.131 ± 0.015 0.548 ± 0.162 nd
9 graphic file with name c4sc02130d-u16.jpg graphic file with name c4sc02130d-u17.jpg 0.011 ± 0.005 0.095 ± 0.061 0.635 ± 0.308 nd
BRD2283 graphic file with name c4sc02130d-u18.jpg graphic file with name c4sc02130d-u19.jpg 0.003 ± 0.002 0.054 ± 0.016 0.604 ± 0.039 nd
10 graphic file with name c4sc02130d-u20.jpg graphic file with name c4sc02130d-u21.jpg 0.021 ± 0.005 0.079 ± 0.042 1.01 ± 0.16 nd
11 graphic file with name c4sc02130d-u22.jpg graphic file with name c4sc02130d-u23.jpg 11.9 ± 1.17 13.23 ± 0.45 >33.33 nd
BRD3349 graphic file with name c4sc02130d-u24.jpg graphic file with name c4sc02130d-u25.jpg 0.011 ± 0.003 0.049 ± 0.005 2.78 ± 0.02 0.04
BRD4884 graphic file with name c4sc02130d-u26.jpg graphic file with name c4sc02130d-u27.jpg 0.029 ± 0.012 0.062 ± 0.031 1.09 ± 0.38 1.29
Residence time T 1/2 (min)
20 143 257 6%
12 graphic file with name c4sc02130d-u28.jpg graphic file with name c4sc02130d-u29.jpg 2.36 ± 0.151 1.10 ± 0.019 >33.33 nd

aValues are the mean of a minimum of two experiments. Data are shown as IC50 values in μM ± standard deviation. Compounds were tested in duplicate in a 12-point dose curve with 3-fold serial dilution starting from 33.33 μM. nd = not determined.

bBrain free fraction estimated based on brain tissue binding experiments.