Table 1.
Genome information and Hsf genes number identified in Rosaceae species
Common name | Scientific name | Chromosome number | Release version | Genome gene number | Identified | Gene name prefix |
---|---|---|---|---|---|---|
Hsf genes | ||||||
Chinese white pear | Pyrus bretschneideri | 34 | NJAU, v1.0 | 42341 | 29 (38) | Pbr |
Apple | Malus domestica | 34 | GDR, v1.0 | 63541 | 25 (49) | MDP |
Peach | Prunus persica | 16 | JGI, v1.0 | 27864 | 17 (21) | ppa |
Strawberry | Fragaria vesca | 14 | GDR, v1.0 | 32831 | 16(16) | gene |
Chinese plum | Prunus mume | 16 | BFU, v1.0 | 31390 | 17 (20) | Pm |
European pear | Pyrus communis | 34 | GDR, v1.0 | 43419 | 33 (41) | PCP |
In this study we totally investigated six Rosaceae species genomes. NJAU, Nanjing Agricultural Univerisity (http://peargenome.njau.edu.cn/); GDR, Genome Database for Rosaceae (http://www.rosaceae.org/); JGI, Joint Genome Institude (http://www.jgi.doe.gov/); BFU, Beijing Forestry University (http://prunusmumegenome.bjfu.edu.cn/index.jsp). The numbers in parenthesis show gene count before filtering the unanchored and incomplete genes.