Table 1. Type, Number of Atoms, and Mass for All of the Coarse-Grained Sites in the LIME Representation.
CG type | CG type color | CG site | atoms per CG type | mass of CG type (amu) |
---|---|---|---|---|
Ia | black | DSPS 1 | COO– | 44.0 |
Ib | black | DSPS 1 | COOH | 45.0 |
II | magenta | DSPS 2 | C2H3NH3 | 44.1 |
III | yellow | DSPS 3 | PO4 | 95.0 |
IV | red | DSPS 4, 21PC 3 | C3HO2 | 71.1 |
V | orange | DSPS 11, 21PC 11 | C2H2O2 | 58.0 |
VI | cyan | DSPS 5–9 and 12–16 | C3H6 | 42.1 |
21PC 4–9 and 12–17 | ||||
VII | gray | DSPS 10 and 17 | C2H5 | 29.1 |
21PC 10 and 18 | ||||
VIII | purple | 21PC 1 | C5H13N | 87.2 |
IX | yellow | 21PC 2 | PO4 | 95.0 |