TABLE 1.
VARIANT POSITION (CHR2) |
RS ID | MUTATION | N | FUNCTION | PROTEIN |
POLYPHEN-2 SCORE |
REFERENCE |
---|---|---|---|---|---|---|---|
38302381 | Unknown | c.151C>T | 1 | Missense | P51S | 1.0 | This study |
38302291 | rs9282671 | c.241T>A | 1 | Missense | Y81N | 1.0 | 40 |
38302180 | Unknown | c.352C>T | 1 | Missense | P118S† | 1.0 | This study |
38301879 | rs72549383 | c.653A>T | 1 | Missense | D218V | 0.892 | This study |
38301847 | rs57865060 | c.685G>A | 2 | Missense | E229K | 0.781 | 22,41 |
38298394 | rs28936414 | c.1103G>A | 4 | Missense | R368H | 1.0 | 42,43 |
38398169 | rs4986888 | c.1328C>G | 1 | Missense | A443G | 0.04 | 44,45,46 |
Total | 11 |
For each mutation, the table lists the genomic location (variant position on chromosome 2), the rs ID if known, the number of times the mutation is observed (N), the functional consequence of the mutation, the protein location of the mutation, the PolyPhen-2 score, and reference(s) if previously reported. The mutation is indicated as the basepair change in the cDNA (“complementary” DNA, which is the DNA copy of the messenger RNA). For example, c.151C>T is a mutation that causes the C at cDNA position 151 to be replaced with a T. The mutation effect on the protein is indicated using the single letter code for amino acids and the protein position. For example, P51S indicates that the mutation has caused a change in the amino acid at position 51 from the wild type Proline to the mutant Serine.
P118T has been previously reported in an ethnically mixed white population.47