Table 3. Rate Constants for Turnover of Whole Substrates and the Substrate Pieces Catalyzed by ScOMPDC, ScTIM and hlGPDHa.
enzyme | kcat (s–1)b | (kcat/Km) (M–1 s–1)b | (kcat/Km)E (M–1 s–1)c | (kcat/Km)E·HPi (M–1 s–1)c | Kd (M)c | k′cat (s–1)d |
---|---|---|---|---|---|---|
ScOMPDCe | 16 | 1.1 × 107 | 0.026 | 1600 | ≈ 0.1 | ≈ 160f |
ScTIM | 8900g | 2.2 × 108g | 0.062h | 48h | ||
hlGPDH | 240i | 4.6 × 106i | 0.050 | 1100j | 0.005 | 5.5 |
Enzyme-catalyzed reactions of the following whole substrates and substrate pieces: OMPDC; OMP and EO + HPO32–; ScTIM; GAP and GA + HPO32–; hlGPDH; DHAP and GA + HPO32–.
Kinetic parameters for turnover of the whole substrate.
Rate constant for turnover of the complex between the enzyme and substrate pieces (Scheme 4), estimated as k′cat = [(kcat/Km)E·HPi]Kd.
Published kinetic parameters.10
Calculated using (kcat/Km)E·HPi = 1600 M–1 s–1 and Kd ≈ 0.1 M.10
Kinetic parameters for ScTIM-catalyzed isomerization of GAP.54
Table 1.
Table 2.
Calculated from (kcat/Km)E·X/KX = 16000 M–2 and KX = 0.070 M (Table 2).